STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH43007.1Glutamine--fructose-6-phosphate transaminase. (338 aa)    
Predicted Functional Partners:
NagA
N-acetylglucosamine 6-phosphate deacetylase.
 
 
 0.995
SEH38137.1
Glucosamine kinase.
 
  
 0.945
SEH41507.1
Fructokinase.
 
 
 0.931
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
 
 0.926
SEH80454.1
Mannose-6-phosphate isomerase, type 2.
     
 0.903
SEI19322.1
Mannose-6-phosphate isomerase, type 2.
     
 0.903
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.902
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
     
  0.900
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
     
  0.900
SEI18557.1
Glutamate synthase (NADH) large subunit.
     
  0.900
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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