Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LpdA | SEH70451.1 | SAMN05192544_1011209 | SAMN05192544_1006178 | Dihydrolipoamide dehydrogenase. | Transketolase subunit A. | 0.517 |
LpdA | SEH70464.1 | SAMN05192544_1011209 | SAMN05192544_1006179 | Dihydrolipoamide dehydrogenase. | Transketolase subunit B. | 0.517 |
LpdA | SEI26256.1 | SAMN05192544_1011209 | SAMN05192544_106813 | Dihydrolipoamide dehydrogenase. | Pyruvate dehydrogenase E1 component beta subunit. | 0.999 |
LpdA | SEI27737.1 | SAMN05192544_1011209 | SAMN05192544_109613 | Dihydrolipoamide dehydrogenase. | Pyruvate dehydrogenase E1 component beta subunit. | 0.999 |
LpdA | Tkt | SAMN05192544_1011209 | SAMN05192544_101898 | Dihydrolipoamide dehydrogenase. | Transketolase; Belongs to the transketolase family. | 0.517 |
LpdA | prs | SAMN05192544_1011209 | SAMN05192544_1001493 | Dihydrolipoamide dehydrogenase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.993 |
LpdA | rpiA | SAMN05192544_1011209 | SAMN05192544_10972 | Dihydrolipoamide dehydrogenase. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.511 |
SEH70451.1 | LpdA | SAMN05192544_1006178 | SAMN05192544_1011209 | Transketolase subunit A. | Dihydrolipoamide dehydrogenase. | 0.517 |
SEH70451.1 | SEH70464.1 | SAMN05192544_1006178 | SAMN05192544_1006179 | Transketolase subunit A. | Transketolase subunit B. | 0.999 |
SEH70451.1 | SEI27288.1 | SAMN05192544_1006178 | SAMN05192544_108514 | Transketolase subunit A. | Phosphomannomutase. | 0.927 |
SEH70451.1 | SEI27737.1 | SAMN05192544_1006178 | SAMN05192544_109613 | Transketolase subunit A. | Pyruvate dehydrogenase E1 component beta subunit. | 0.727 |
SEH70451.1 | Tkt | SAMN05192544_1006178 | SAMN05192544_101898 | Transketolase subunit A. | Transketolase; Belongs to the transketolase family. | 0.900 |
SEH70451.1 | prs | SAMN05192544_1006178 | SAMN05192544_1001493 | Transketolase subunit A. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.943 |
SEH70451.1 | rbsK | SAMN05192544_1006178 | SAMN05192544_1007230 | Transketolase subunit A. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.728 |
SEH70451.1 | rpiA | SAMN05192544_1006178 | SAMN05192544_10972 | Transketolase subunit A. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.934 |
SEH70464.1 | LpdA | SAMN05192544_1006179 | SAMN05192544_1011209 | Transketolase subunit B. | Dihydrolipoamide dehydrogenase. | 0.517 |
SEH70464.1 | SEH70451.1 | SAMN05192544_1006179 | SAMN05192544_1006178 | Transketolase subunit B. | Transketolase subunit A. | 0.999 |
SEH70464.1 | SEI27288.1 | SAMN05192544_1006179 | SAMN05192544_108514 | Transketolase subunit B. | Phosphomannomutase. | 0.925 |
SEH70464.1 | SEI27737.1 | SAMN05192544_1006179 | SAMN05192544_109613 | Transketolase subunit B. | Pyruvate dehydrogenase E1 component beta subunit. | 0.703 |
SEH70464.1 | Tkt | SAMN05192544_1006179 | SAMN05192544_101898 | Transketolase subunit B. | Transketolase; Belongs to the transketolase family. | 0.908 |
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