STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH47311.1Transcriptional regulator, AsnC family. (165 aa)    
Predicted Functional Partners:
SEH41635.1
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein.
  
     0.770
SEI10690.1
Transcriptional regulator, AsnC family.
  
     0.741
SEH47302.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.711
SEH72967.1
Transcriptional regulator, AsnC family.
  
     0.497
SEI15410.1
2-haloacid dehalogenase.
  
     0.462
SEH47627.1
2-haloacid dehalogenase.
  
     0.453
SEH47653.1
L-amino acid N-acyltransferase YncA.
 
    0.424
SEI15451.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.402
SEI15417.1
Predicted N-acetyltransferase YhbS.
 
    0.400
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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