STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH45229.1NitT/TauT family transport system substrate-binding protein. (346 aa)    
Predicted Functional Partners:
SEH45246.1
NitT/TauT family transport system permease protein.
 
  
 0.946
SEH45239.1
NitT/TauT family transport system ATP-binding protein.
 
  
 0.917
SEH45257.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
     0.767
SEH45269.1
Sulfonate transport system substrate-binding protein.
 
     0.672
SEH68625.1
Protein of unknown function.
   
    0.670
SEI26449.1
NitT/TauT family transport system permease protein.
 
  
 0.620
SEI27793.1
Sulfonate transport system permease protein.
 
  
 0.587
MsuE
FMN reductase.
  
    0.575
SEI26450.1
NitT/TauT family transport system ATP-binding protein.
 
  
 0.570
SEH45175.1
Sulfonate transport system substrate-binding protein.
 
     0.568
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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