Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH47752.1 | SEH47764.1 | SAMN05192544_1002232 | SAMN05192544_1002233 | Hypothetical protein. | Peroxiredoxin. | 0.608 |
SEH47752.1 | SEH47777.1 | SAMN05192544_1002232 | SAMN05192544_1002234 | Hypothetical protein. | Transcriptional regulator, MarR family with acetyltransferase activity. | 0.412 |
SEH47764.1 | SEH47752.1 | SAMN05192544_1002233 | SAMN05192544_1002232 | Peroxiredoxin. | Hypothetical protein. | 0.608 |
SEH47764.1 | SEH47777.1 | SAMN05192544_1002233 | SAMN05192544_1002234 | Peroxiredoxin. | Transcriptional regulator, MarR family with acetyltransferase activity. | 0.546 |
SEH47777.1 | SEH47752.1 | SAMN05192544_1002234 | SAMN05192544_1002232 | Transcriptional regulator, MarR family with acetyltransferase activity. | Hypothetical protein. | 0.412 |
SEH47777.1 | SEH47764.1 | SAMN05192544_1002234 | SAMN05192544_1002233 | Transcriptional regulator, MarR family with acetyltransferase activity. | Peroxiredoxin. | 0.546 |
SEH47777.1 | SEI00854.1 | SAMN05192544_1002234 | SAMN05192544_1015122 | Transcriptional regulator, MarR family with acetyltransferase activity. | Hypothetical protein. | 0.475 |
SEH47777.1 | SEI02168.1 | SAMN05192544_1002234 | SAMN05192544_101626 | Transcriptional regulator, MarR family with acetyltransferase activity. | Acetoacetate decarboxylase. | 0.493 |
SEH47777.1 | SEI21281.1 | SAMN05192544_1002234 | SAMN05192544_103959 | Transcriptional regulator, MarR family with acetyltransferase activity. | Transcriptional regulator, TetR family. | 0.455 |
SEH47777.1 | SEI25844.1 | SAMN05192544_1002234 | SAMN05192544_10632 | Transcriptional regulator, MarR family with acetyltransferase activity. | GntR family transcriptional regulator. | 0.447 |
SEH47777.1 | SEI26707.1 | SAMN05192544_1002234 | SAMN05192544_107511 | Transcriptional regulator, MarR family with acetyltransferase activity. | N-acetylmuramoyl-L-alanine amidase. | 0.511 |
SEI00854.1 | SEH47777.1 | SAMN05192544_1015122 | SAMN05192544_1002234 | Hypothetical protein. | Transcriptional regulator, MarR family with acetyltransferase activity. | 0.475 |
SEI00854.1 | SEI26707.1 | SAMN05192544_1015122 | SAMN05192544_107511 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.773 |
SEI02168.1 | SEH47777.1 | SAMN05192544_101626 | SAMN05192544_1002234 | Acetoacetate decarboxylase. | Transcriptional regulator, MarR family with acetyltransferase activity. | 0.493 |
SEI02168.1 | SEI26707.1 | SAMN05192544_101626 | SAMN05192544_107511 | Acetoacetate decarboxylase. | N-acetylmuramoyl-L-alanine amidase. | 0.404 |
SEI21281.1 | SEH47777.1 | SAMN05192544_103959 | SAMN05192544_1002234 | Transcriptional regulator, TetR family. | Transcriptional regulator, MarR family with acetyltransferase activity. | 0.455 |
SEI21281.1 | SEI26707.1 | SAMN05192544_103959 | SAMN05192544_107511 | Transcriptional regulator, TetR family. | N-acetylmuramoyl-L-alanine amidase. | 0.527 |
SEI25844.1 | SEH47777.1 | SAMN05192544_10632 | SAMN05192544_1002234 | GntR family transcriptional regulator. | Transcriptional regulator, MarR family with acetyltransferase activity. | 0.447 |
SEI26707.1 | SEH47777.1 | SAMN05192544_107511 | SAMN05192544_1002234 | N-acetylmuramoyl-L-alanine amidase. | Transcriptional regulator, MarR family with acetyltransferase activity. | 0.511 |
SEI26707.1 | SEI00854.1 | SAMN05192544_107511 | SAMN05192544_1015122 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.773 |
page 1 of 2