STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH48449.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (295 aa)    
Predicted Functional Partners:
SEH73218.1
DNA-binding transcriptional regulator, LysR family.
  
     0.752
SEH49264.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.741
SEI18840.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.700
SEH48438.1
citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family.
 
    0.655
SEI23508.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.608
SEI27834.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.572
SEH48416.1
Hypothetical protein.
       0.498
SEH48429.1
Protein of unknown function.
       0.498
SEH55700.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.497
SEI25409.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.475
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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