Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HpnH | HpnJ | SAMN05192544_1003192 | SAMN05192544_104636 | Hopanoid biosynthesis associated radical SAM protein HpnH. | Hopanoid biosynthesis associated radical SAM protein HpnJ. | 0.768 |
HpnH | HpnJ-2 | SAMN05192544_1003192 | SAMN05192544_11076 | Hopanoid biosynthesis associated radical SAM protein HpnH. | Hopanoid biosynthesis associated radical SAM protein HpnJ. | 0.770 |
HpnH | SEH53553.1 | SAMN05192544_1003192 | SAMN05192544_1003185 | Hopanoid biosynthesis associated radical SAM protein HpnH. | Squalene-associated FAD-dependent desaturase. | 0.777 |
HpnH | SEH53575.1 | SAMN05192544_1003192 | SAMN05192544_1003187 | Hopanoid biosynthesis associated radical SAM protein HpnH. | Hopanoid-associated phosphorylase. | 0.800 |
HpnH | SEH53604.1 | SAMN05192544_1003192 | SAMN05192544_1003190 | Hopanoid biosynthesis associated radical SAM protein HpnH. | Hypothetical protein. | 0.820 |
HpnH | SEH53648.1 | SAMN05192544_1003192 | SAMN05192544_1003194 | Hopanoid biosynthesis associated radical SAM protein HpnH. | Hopene-associated glycosyltransferase HpnB. | 0.805 |
HpnH | SEH53688.1 | SAMN05192544_1003192 | SAMN05192544_1003197 | Hopanoid biosynthesis associated radical SAM protein HpnH. | Dihydroflavonol-4-reductase. | 0.782 |
HpnH | SEI23173.1 | SAMN05192544_1003192 | SAMN05192544_104634 | Hopanoid biosynthesis associated radical SAM protein HpnH. | Putative membrane protein. | 0.729 |
HpnH | Shc | SAMN05192544_1003192 | SAMN05192544_1003186 | Hopanoid biosynthesis associated radical SAM protein HpnH. | Squalene-hopene/tetraprenyl-beta-curcumene cyclase. | 0.821 |
HpnH | ispH | SAMN05192544_1003192 | SAMN05192544_1003193 | Hopanoid biosynthesis associated radical SAM protein HpnH. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.837 |
HpnJ | HpnH | SAMN05192544_104636 | SAMN05192544_1003192 | Hopanoid biosynthesis associated radical SAM protein HpnJ. | Hopanoid biosynthesis associated radical SAM protein HpnH. | 0.768 |
HpnJ | SEH53575.1 | SAMN05192544_104636 | SAMN05192544_1003187 | Hopanoid biosynthesis associated radical SAM protein HpnJ. | Hopanoid-associated phosphorylase. | 0.669 |
HpnJ | SEH53604.1 | SAMN05192544_104636 | SAMN05192544_1003190 | Hopanoid biosynthesis associated radical SAM protein HpnJ. | Hypothetical protein. | 0.689 |
HpnJ | SEH53648.1 | SAMN05192544_104636 | SAMN05192544_1003194 | Hopanoid biosynthesis associated radical SAM protein HpnJ. | Hopene-associated glycosyltransferase HpnB. | 0.762 |
HpnJ | SEH53688.1 | SAMN05192544_104636 | SAMN05192544_1003197 | Hopanoid biosynthesis associated radical SAM protein HpnJ. | Dihydroflavonol-4-reductase. | 0.750 |
HpnJ | SEI23173.1 | SAMN05192544_104636 | SAMN05192544_104634 | Hopanoid biosynthesis associated radical SAM protein HpnJ. | Putative membrane protein. | 0.945 |
HpnJ | Shc | SAMN05192544_104636 | SAMN05192544_1003186 | Hopanoid biosynthesis associated radical SAM protein HpnJ. | Squalene-hopene/tetraprenyl-beta-curcumene cyclase. | 0.745 |
HpnJ-2 | HpnH | SAMN05192544_11076 | SAMN05192544_1003192 | Hopanoid biosynthesis associated radical SAM protein HpnJ. | Hopanoid biosynthesis associated radical SAM protein HpnH. | 0.770 |
HpnJ-2 | SEH53575.1 | SAMN05192544_11076 | SAMN05192544_1003187 | Hopanoid biosynthesis associated radical SAM protein HpnJ. | Hopanoid-associated phosphorylase. | 0.663 |
HpnJ-2 | SEH53604.1 | SAMN05192544_11076 | SAMN05192544_1003190 | Hopanoid biosynthesis associated radical SAM protein HpnJ. | Hypothetical protein. | 0.687 |
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