Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH54518.1 | SEH54531.1 | SAMN05192544_1003269 | SAMN05192544_1003270 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.740 |
SEH54518.1 | SEH54544.1 | SAMN05192544_1003269 | SAMN05192544_1003271 | Hypothetical protein. | FecR family protein. | 0.502 |
SEH54518.1 | SEH54558.1 | SAMN05192544_1003269 | SAMN05192544_1003272 | Hypothetical protein. | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.535 |
SEH54518.1 | SEH59959.1 | SAMN05192544_1003269 | SAMN05192544_1004137 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.465 |
SEH54518.1 | SEH98616.1 | SAMN05192544_1003269 | SAMN05192544_1014162 | Hypothetical protein. | FecR family protein. | 0.448 |
SEH54518.1 | SEI12581.1 | SAMN05192544_1003269 | SAMN05192544_102349 | Hypothetical protein. | DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.474 |
SEH54518.1 | SEI13941.1 | SAMN05192544_1003269 | SAMN05192544_1024113 | Hypothetical protein. | DNA translocase FtsK. | 0.474 |
SEH54518.1 | SEI20223.1 | SAMN05192544_1003269 | SAMN05192544_103685 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.444 |
SEH54518.1 | SEI22704.1 | SAMN05192544_1003269 | SAMN05192544_104448 | Hypothetical protein. | Hypothetical protein. | 0.539 |
SEH54518.1 | SEI23983.1 | SAMN05192544_1003269 | SAMN05192544_105033 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.465 |
SEH54531.1 | SEH54518.1 | SAMN05192544_1003270 | SAMN05192544_1003269 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.740 |
SEH54531.1 | SEH54544.1 | SAMN05192544_1003270 | SAMN05192544_1003271 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.877 |
SEH54531.1 | SEH54558.1 | SAMN05192544_1003270 | SAMN05192544_1003272 | Iron complex outermembrane recepter protein. | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.786 |
SEH54531.1 | SEI23983.1 | SAMN05192544_1003270 | SAMN05192544_105033 | Iron complex outermembrane recepter protein. | Iron complex outermembrane recepter protein. | 0.522 |
SEH54544.1 | SEH54518.1 | SAMN05192544_1003271 | SAMN05192544_1003269 | FecR family protein. | Hypothetical protein. | 0.502 |
SEH54544.1 | SEH54531.1 | SAMN05192544_1003271 | SAMN05192544_1003270 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.877 |
SEH54544.1 | SEH54558.1 | SAMN05192544_1003271 | SAMN05192544_1003272 | FecR family protein. | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.974 |
SEH54544.1 | SEI20223.1 | SAMN05192544_1003271 | SAMN05192544_103685 | FecR family protein. | PAS domain S-box-containing protein. | 0.427 |
SEH54558.1 | SEH54518.1 | SAMN05192544_1003272 | SAMN05192544_1003269 | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.535 |
SEH54558.1 | SEH54531.1 | SAMN05192544_1003272 | SAMN05192544_1003270 | RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | Iron complex outermembrane recepter protein. | 0.786 |
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