STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH55075.1Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (708 aa)    
Predicted Functional Partners:
SEH55061.1
Iron complex transport system ATP-binding protein.
 
 0.998
SEH55110.1
Iron complex transport system substrate-binding protein.
 
 
 0.992
SEI19735.1
Iron complex transport system ATP-binding protein.
 
 
 0.953
SEH48977.1
Iron complex transport system ATP-binding protein.
 
 
 0.924
SEI19749.1
Iron complex transport system substrate-binding protein.
 
 
 0.900
FhuF
Ferric iron reductase protein FhuF.
 
  
 0.896
SEH48946.1
Iron complex transport system substrate-binding protein.
 
 
 0.878
SEH41936.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
 
 
 0.832
SEH55046.1
Taurine dioxygenase, alpha-ketoglutarate-dependent.
     
 0.800
SEH55028.1
MbtH protein.
  
  
 0.600
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.