STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH55597.1NIPSNAP protein. (112 aa)    
Predicted Functional Partners:
SEH55586.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
     0.881
SEH55575.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.774
SEH55567.1
AraC family transcriptional regulator, transcriptional activator of pobA.
 
     0.597
SEH55605.1
MFS transporter, AAHS family, 4-hydroxybenzoate transporter.
       0.570
SEH95764.1
Hypothetical protein.
  
     0.483
SEH78902.1
Sugar phosphate isomerase/epimerase.
 
     0.455
SEH78927.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
     0.454
SEI28103.1
Mannose-6-phosphate isomerase, cupin superfamily.
  
     0.453
SEI26832.1
NIPSNAP protein.
  
     0.423
SEH78915.1
NIPSNAP protein.
  
     0.411
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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