Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH56304.1 | SEH56318.1 | SAMN05192544_1003411 | SAMN05192544_1003412 | Putative transport protein. | Diguanylate cyclase/phosphodiesterase. | 0.409 |
SEH56304.1 | SEH78094.1 | SAMN05192544_1003411 | SAMN05192544_1008116 | Putative transport protein. | Uncharacterized membrane protein YkgB. | 0.407 |
SEH56304.1 | SEI22453.1 | SAMN05192544_1003411 | SAMN05192544_104358 | Putative transport protein. | Predicted Permease Membrane Region. | 0.538 |
SEH56304.1 | SEI27870.1 | SAMN05192544_1003411 | SAMN05192544_109922 | Putative transport protein. | Cupin domain-containing protein. | 0.445 |
SEH56318.1 | SEH56304.1 | SAMN05192544_1003412 | SAMN05192544_1003411 | Diguanylate cyclase/phosphodiesterase. | Putative transport protein. | 0.409 |
SEH78094.1 | SEH56304.1 | SAMN05192544_1008116 | SAMN05192544_1003411 | Uncharacterized membrane protein YkgB. | Putative transport protein. | 0.407 |
SEH78094.1 | SEI27870.1 | SAMN05192544_1008116 | SAMN05192544_109922 | Uncharacterized membrane protein YkgB. | Cupin domain-containing protein. | 0.548 |
SEI22453.1 | SEH56304.1 | SAMN05192544_104358 | SAMN05192544_1003411 | Predicted Permease Membrane Region. | Putative transport protein. | 0.538 |
SEI27870.1 | SEH56304.1 | SAMN05192544_109922 | SAMN05192544_1003411 | Cupin domain-containing protein. | Putative transport protein. | 0.445 |
SEI27870.1 | SEH78094.1 | SAMN05192544_109922 | SAMN05192544_1008116 | Cupin domain-containing protein. | Uncharacterized membrane protein YkgB. | 0.548 |