Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH60422.1 | SEH60438.1 | SAMN05192544_1004170 | SAMN05192544_1004171 | Hypothetical protein. | PQQ-like domain-containing protein. | 0.929 |
SEH60422.1 | SEH60451.1 | SAMN05192544_1004170 | SAMN05192544_1004172 | Hypothetical protein. | Phosphonoacetate hydrolase. | 0.474 |
SEH60438.1 | SEH60422.1 | SAMN05192544_1004171 | SAMN05192544_1004170 | PQQ-like domain-containing protein. | Hypothetical protein. | 0.929 |
SEH60438.1 | SEH60451.1 | SAMN05192544_1004171 | SAMN05192544_1004172 | PQQ-like domain-containing protein. | Phosphonoacetate hydrolase. | 0.550 |
SEH60451.1 | SEH60422.1 | SAMN05192544_1004172 | SAMN05192544_1004170 | Phosphonoacetate hydrolase. | Hypothetical protein. | 0.474 |
SEH60451.1 | SEH60438.1 | SAMN05192544_1004172 | SAMN05192544_1004171 | Phosphonoacetate hydrolase. | PQQ-like domain-containing protein. | 0.550 |
SEH60451.1 | SEH94190.1 | SAMN05192544_1004172 | SAMN05192544_10136 | Phosphonoacetate hydrolase. | Sulfate permease, MFS superfamily. | 0.436 |
SEH60451.1 | putA | SAMN05192544_1004172 | SAMN05192544_100157 | Phosphonoacetate hydrolase. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.402 |
SEH94190.1 | SEH60451.1 | SAMN05192544_10136 | SAMN05192544_1004172 | Sulfate permease, MFS superfamily. | Phosphonoacetate hydrolase. | 0.436 |
putA | SEH60451.1 | SAMN05192544_100157 | SAMN05192544_1004172 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Phosphonoacetate hydrolase. | 0.402 |