STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH61104.1Outer membrane receptor proteins, mostly Fe transport. (780 aa)    
Predicted Functional Partners:
SEI20462.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.780
TolA
Cell division and transport-associated protein TolA.
  
 
 0.733
SEI24036.1
Protein TonB.
  
 
 0.733
SEI00755.1
mxaL protein.
 
     0.707
SEH60590.1
PQQ-dependent dehydrogenase, methanol/ethanol family.
 
    0.705
SEH60561.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
   
 0.675
SEI00792.1
mxaA protein.
  
     0.670
SEI26772.1
Alcohol dehydrogenase (cytochrome c).
 
    0.670
SEH61115.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
  
 0.666
SEI02499.1
Hypothetical protein.
  
 
 0.652
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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