Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH55046.1 | SEH58294.1 | SAMN05192544_1003307 | SAMN05192544_100422 | Taurine dioxygenase, alpha-ketoglutarate-dependent. | 4Fe-4S single cluster domain of Ferredoxin I. | 0.471 |
SEH58284.1 | SEH58294.1 | SAMN05192544_100421 | SAMN05192544_100422 | Hypothetical protein. | 4Fe-4S single cluster domain of Ferredoxin I. | 0.512 |
SEH58294.1 | SEH55046.1 | SAMN05192544_100422 | SAMN05192544_1003307 | 4Fe-4S single cluster domain of Ferredoxin I. | Taurine dioxygenase, alpha-ketoglutarate-dependent. | 0.471 |
SEH58294.1 | SEH58284.1 | SAMN05192544_100422 | SAMN05192544_100421 | 4Fe-4S single cluster domain of Ferredoxin I. | Hypothetical protein. | 0.512 |
SEH58294.1 | SEH73992.1 | SAMN05192544_100422 | SAMN05192544_1007105 | 4Fe-4S single cluster domain of Ferredoxin I. | Nicotinamidase-related amidase. | 0.636 |
SEH58294.1 | SEH80364.1 | SAMN05192544_100422 | SAMN05192544_100918 | 4Fe-4S single cluster domain of Ferredoxin I. | Glycosyltransferase involved in cell wall bisynthesis. | 0.463 |
SEH58294.1 | SEH80369.1 | SAMN05192544_100422 | SAMN05192544_100919 | 4Fe-4S single cluster domain of Ferredoxin I. | Hypothetical protein. | 0.510 |
SEH58294.1 | SEH91864.1 | SAMN05192544_100422 | SAMN05192544_101244 | 4Fe-4S single cluster domain of Ferredoxin I. | Hypothetical protein. | 0.608 |
SEH58294.1 | SEH95893.1 | SAMN05192544_100422 | SAMN05192544_1013169 | 4Fe-4S single cluster domain of Ferredoxin I. | Tetratricopeptide repeat-containing protein. | 0.521 |
SEH58294.1 | SEI10529.1 | SAMN05192544_100422 | SAMN05192544_102158 | 4Fe-4S single cluster domain of Ferredoxin I. | Phage shock protein A (PspA) family protein. | 0.476 |
SEH58294.1 | SEI19026.1 | SAMN05192544_100422 | SAMN05192544_103367 | 4Fe-4S single cluster domain of Ferredoxin I. | NACHT domain-containing protein. | 0.492 |
SEH58294.1 | SEI28586.1 | SAMN05192544_100422 | SAMN05192544_11436 | 4Fe-4S single cluster domain of Ferredoxin I. | Hypothetical protein. | 0.689 |
SEH73992.1 | SEH58294.1 | SAMN05192544_1007105 | SAMN05192544_100422 | Nicotinamidase-related amidase. | 4Fe-4S single cluster domain of Ferredoxin I. | 0.636 |
SEH73992.1 | SEI28586.1 | SAMN05192544_1007105 | SAMN05192544_11436 | Nicotinamidase-related amidase. | Hypothetical protein. | 0.583 |
SEH80364.1 | SEH58294.1 | SAMN05192544_100918 | SAMN05192544_100422 | Glycosyltransferase involved in cell wall bisynthesis. | 4Fe-4S single cluster domain of Ferredoxin I. | 0.463 |
SEH80364.1 | SEH80369.1 | SAMN05192544_100918 | SAMN05192544_100919 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.954 |
SEH80364.1 | SEI10529.1 | SAMN05192544_100918 | SAMN05192544_102158 | Glycosyltransferase involved in cell wall bisynthesis. | Phage shock protein A (PspA) family protein. | 0.497 |
SEH80364.1 | SEI28586.1 | SAMN05192544_100918 | SAMN05192544_11436 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.423 |
SEH80369.1 | SEH58294.1 | SAMN05192544_100919 | SAMN05192544_100422 | Hypothetical protein. | 4Fe-4S single cluster domain of Ferredoxin I. | 0.510 |
SEH80369.1 | SEH80364.1 | SAMN05192544_100919 | SAMN05192544_100918 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.954 |
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