STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH61324.1Transcriptional regulator, GntR family. (231 aa)    
Predicted Functional Partners:
SEI06454.1
Transcriptional regulator, GntR family.
  
  
 0.782
potA-3
Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
       0.775
SEI02008.1
Transcriptional regulator, GntR family.
  
     0.774
SEH47114.1
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator.
  
     0.773
SEH75085.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.771
SEH69237.1
Transcriptional regulator, GntR family.
  
     0.767
SEH52843.1
Transcriptional regulator, GntR family.
  
  
 0.764
SEI27123.1
Transcriptional regulator, GntR family.
  
  
 0.764
SEH61539.1
Transcriptional regulator, GntR family.
  
  
 0.760
SEI21104.1
Transcriptional regulator, GntR family.
  
     0.760
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.