Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH48562.1 | SEH52876.1 | SAMN05192544_1002307 | SAMN05192544_1003108 | AAA ATPase domain-containing protein. | Multi-sensor hybrid histidine kinase. | 0.630 |
SEH48562.1 | SEH55136.1 | SAMN05192544_1002307 | SAMN05192544_1003313 | AAA ATPase domain-containing protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.412 |
SEH48562.1 | SEH58984.1 | SAMN05192544_1002307 | SAMN05192544_100470 | AAA ATPase domain-containing protein. | Hypothetical protein. | 0.440 |
SEH48562.1 | SEI20223.1 | SAMN05192544_1002307 | SAMN05192544_103685 | AAA ATPase domain-containing protein. | PAS domain S-box-containing protein. | 0.819 |
SEH48562.1 | SEI28625.1 | SAMN05192544_1002307 | SAMN05192544_11491 | AAA ATPase domain-containing protein. | PAS domain S-box-containing protein. | 0.689 |
SEH52876.1 | SEH48562.1 | SAMN05192544_1003108 | SAMN05192544_1002307 | Multi-sensor hybrid histidine kinase. | AAA ATPase domain-containing protein. | 0.630 |
SEH52876.1 | SEH55136.1 | SAMN05192544_1003108 | SAMN05192544_1003313 | Multi-sensor hybrid histidine kinase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.663 |
SEH52876.1 | SEH58984.1 | SAMN05192544_1003108 | SAMN05192544_100470 | Multi-sensor hybrid histidine kinase. | Hypothetical protein. | 0.528 |
SEH52876.1 | SEI20223.1 | SAMN05192544_1003108 | SAMN05192544_103685 | Multi-sensor hybrid histidine kinase. | PAS domain S-box-containing protein. | 0.990 |
SEH52876.1 | SEI28625.1 | SAMN05192544_1003108 | SAMN05192544_11491 | Multi-sensor hybrid histidine kinase. | PAS domain S-box-containing protein. | 0.989 |
SEH55136.1 | SEH48562.1 | SAMN05192544_1003313 | SAMN05192544_1002307 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | AAA ATPase domain-containing protein. | 0.412 |
SEH55136.1 | SEH52876.1 | SAMN05192544_1003313 | SAMN05192544_1003108 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Multi-sensor hybrid histidine kinase. | 0.663 |
SEH55136.1 | SEH58984.1 | SAMN05192544_1003313 | SAMN05192544_100470 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.475 |
SEH55136.1 | SEH64161.1 | SAMN05192544_1003313 | SAMN05192544_100587 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.627 |
SEH55136.1 | SEI20223.1 | SAMN05192544_1003313 | SAMN05192544_103685 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | PAS domain S-box-containing protein. | 0.650 |
SEH55136.1 | SEI28625.1 | SAMN05192544_1003313 | SAMN05192544_11491 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | PAS domain S-box-containing protein. | 0.526 |
SEH58969.1 | SEH58984.1 | SAMN05192544_100469 | SAMN05192544_100470 | Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.926 |
SEH58969.1 | SEH59002.1 | SAMN05192544_100469 | SAMN05192544_100471 | Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.509 |
SEH58969.1 | SEH59012.1 | SAMN05192544_100469 | SAMN05192544_100472 | Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | Serine O-acetyltransferase. | 0.624 |
SEH58969.1 | SEH59031.1 | SAMN05192544_100469 | SAMN05192544_100473 | Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | Thiosulfate sulfurtransferase. | 0.523 |
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