STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH64908.1Hypothetical protein. (328 aa)    
Predicted Functional Partners:
SEH64922.1
Putative N-acetyltransferase, MSMEG_0567 N-terminal domain family.
 
     0.954
SEH64933.1
Radical SAM protein, MSMEG_0568 family.
 
     0.954
SEH64944.1
Aliphatic nitrilase.
 
   
 0.954
SEH64960.1
GTP cyclohydrolase II.
 
   
 0.952
SEH64893.1
Glycosyltransferase, MSMEG_0565 family.
 
     0.950
SEH64882.1
MSMEG_0570 family protein.
 
   
 0.942
SEH64870.1
Putative flavoprotein involved in K+ transport.
 
   
 0.928
SEH64857.1
Probable biosynthetic protein, Pnap_2097 family.
 
     0.915
SEI22990.1
Aliphatic nitrilase.
 
   
 0.802
SEH64973.1
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain.
 
     0.715
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.