Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HpaC-2 | SEH66343.1 | SAMN05192544_1021126 | SAMN05192544_1005243 | 4-hydroxyphenylacetate 3-monooxygenase reductase component. | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | 0.576 |
HpaC-2 | SEH66355.1 | SAMN05192544_1021126 | SAMN05192544_1005244 | 4-hydroxyphenylacetate 3-monooxygenase reductase component. | 3-hydroxypropanoate dehydrogenase. | 0.404 |
HpaC-2 | SEH66367.1 | SAMN05192544_1021126 | SAMN05192544_1005245 | 4-hydroxyphenylacetate 3-monooxygenase reductase component. | Riboflavin kinase / FMN adenylyltransferase. | 0.903 |
SEH66325.1 | SEH66343.1 | SAMN05192544_1005242 | SAMN05192544_1005243 | Flavin reductase (NADH)/flavin reductase/chlorophenol-4-monooxygenase component 1. | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | 0.983 |
SEH66325.1 | SEH66355.1 | SAMN05192544_1005242 | SAMN05192544_1005244 | Flavin reductase (NADH)/flavin reductase/chlorophenol-4-monooxygenase component 1. | 3-hydroxypropanoate dehydrogenase. | 0.658 |
SEH66325.1 | SEH66367.1 | SAMN05192544_1005242 | SAMN05192544_1005245 | Flavin reductase (NADH)/flavin reductase/chlorophenol-4-monooxygenase component 1. | Riboflavin kinase / FMN adenylyltransferase. | 0.938 |
SEH66343.1 | HpaC-2 | SAMN05192544_1005243 | SAMN05192544_1021126 | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | 4-hydroxyphenylacetate 3-monooxygenase reductase component. | 0.576 |
SEH66343.1 | SEH66325.1 | SAMN05192544_1005243 | SAMN05192544_1005242 | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | Flavin reductase (NADH)/flavin reductase/chlorophenol-4-monooxygenase component 1. | 0.983 |
SEH66343.1 | SEH66355.1 | SAMN05192544_1005243 | SAMN05192544_1005244 | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | 3-hydroxypropanoate dehydrogenase. | 0.526 |
SEH66343.1 | SEH66367.1 | SAMN05192544_1005243 | SAMN05192544_1005245 | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | Riboflavin kinase / FMN adenylyltransferase. | 0.557 |
SEH66343.1 | SEI11932.1 | SAMN05192544_1005243 | SAMN05192544_1022107 | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | Multidrug resistance protein MdtO. | 0.585 |
SEH66343.1 | SEI21445.1 | SAMN05192544_1005243 | SAMN05192544_104016 | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | Hypothetical protein. | 0.608 |
SEH66343.1 | SEI22319.1 | SAMN05192544_1005243 | SAMN05192544_104312 | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | Right handed beta helix region. | 0.524 |
SEH66343.1 | SEI22342.1 | SAMN05192544_1005243 | SAMN05192544_104320 | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | Hypothetical protein. | 0.551 |
SEH66343.1 | SEI25862.1 | SAMN05192544_1005243 | SAMN05192544_106316 | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | N-terminal half of MaoC dehydratase. | 0.709 |
SEH66343.1 | SEI27086.1 | SAMN05192544_1005243 | SAMN05192544_108137 | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | Cytosine permease. | 0.543 |
SEH66355.1 | HpaC-2 | SAMN05192544_1005244 | SAMN05192544_1021126 | 3-hydroxypropanoate dehydrogenase. | 4-hydroxyphenylacetate 3-monooxygenase reductase component. | 0.404 |
SEH66355.1 | SEH66325.1 | SAMN05192544_1005244 | SAMN05192544_1005242 | 3-hydroxypropanoate dehydrogenase. | Flavin reductase (NADH)/flavin reductase/chlorophenol-4-monooxygenase component 1. | 0.658 |
SEH66355.1 | SEH66343.1 | SAMN05192544_1005244 | SAMN05192544_1005243 | 3-hydroxypropanoate dehydrogenase. | 4-hydroxyphenylacetate 3-monooxygenase/chlorophenol-4-monooxygenase component 2. | 0.526 |
SEH66355.1 | SEH66367.1 | SAMN05192544_1005244 | SAMN05192544_1005245 | 3-hydroxypropanoate dehydrogenase. | Riboflavin kinase / FMN adenylyltransferase. | 0.688 |
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