STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH69747.1Two component transcriptional regulator, LuxR family. (263 aa)    
Predicted Functional Partners:
SEH65079.1
PAS domain S-box-containing protein.
 
 
 0.853
SEH65172.1
PAS domain S-box-containing protein.
 
 
 0.853
SEI26528.1
Two-component system, unclassified family, sensor kinase.
 
 
 0.853
SEH69734.1
Two-component system, NarL family, sensor kinase.
 
 
 0.849
SEH40502.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.847
SEH61090.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.846
SEH88857.1
Signal transduction histidine kinase.
 
 
 0.846
SEI09309.1
Two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX.
 
 
 0.818
SEH60477.1
Two-component system, NarL family, sensor kinase.
 
   
 0.774
SEI20231.1
PAS domain S-box-containing protein.
 
 
 0.773
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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