node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH72955.1 | rplC | SAMN05192544_100722 | SAMN05192544_10323 | Hypothetical protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.859 |
SEH72955.1 | rplV | SAMN05192544_100722 | SAMN05192544_10328 | Hypothetical protein. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.875 |
SEH72955.1 | rpmC | SAMN05192544_100722 | SAMN05192544_103211 | Hypothetical protein. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.878 |
SEH72955.1 | rpsB | SAMN05192544_100722 | SAMN05192544_101721 | Hypothetical protein. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.859 |
SEH72955.1 | rpsC | SAMN05192544_100722 | SAMN05192544_10329 | Hypothetical protein. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.930 |
SEH72955.1 | rpsE | SAMN05192544_100722 | SAMN05192544_103220 | Hypothetical protein. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.841 |
SEH72955.1 | rpsH | SAMN05192544_100722 | SAMN05192544_103217 | Hypothetical protein. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.858 |
SEH72955.1 | rpsN | SAMN05192544_100722 | SAMN05192544_103216 | Hypothetical protein. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.837 |
SEH72955.1 | rpsO | SAMN05192544_100722 | SAMN05192544_105520 | Hypothetical protein. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.914 |
SEH72955.1 | rpsQ | SAMN05192544_100722 | SAMN05192544_103212 | Hypothetical protein. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.917 |
rplC | SEH72955.1 | SAMN05192544_10323 | SAMN05192544_100722 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Hypothetical protein. | 0.859 |
rplC | rplV | SAMN05192544_10323 | SAMN05192544_10328 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
rplC | rpmC | SAMN05192544_10323 | SAMN05192544_103211 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.998 |
rplC | rpsB | SAMN05192544_10323 | SAMN05192544_101721 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.996 |
rplC | rpsC | SAMN05192544_10323 | SAMN05192544_10329 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.998 |
rplC | rpsE | SAMN05192544_10323 | SAMN05192544_103220 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.997 |
rplC | rpsH | SAMN05192544_10323 | SAMN05192544_103217 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.997 |
rplC | rpsN | SAMN05192544_10323 | SAMN05192544_103216 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.995 |
rplC | rpsO | SAMN05192544_10323 | SAMN05192544_105520 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.996 |
rplC | rpsQ | SAMN05192544_10323 | SAMN05192544_103212 | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |