STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH86645.1Chromosome partitioning protein, ParB family; Belongs to the ParB family. (321 aa)    
Predicted Functional Partners:
SEH86632.1
Chromosome partitioning protein.
 
 
 0.910
SEI23701.1
Chromosome partitioning protein.
 
 
 0.668
SEI14636.1
Chromosome partitioning protein.
 
 
 0.636
SEH38668.1
Chromosome segregation ATPase.
 
 
 0.630
SEI18963.1
Chromosome partitioning protein.
 
 
 0.599
SEH53411.1
Plasmid segregation oscillating ATPase ParF.
 
 
 0.554
SEH86621.1
Initiator Replication protein.
     
 0.553
SEI23710.1
Chromosome partitioning protein.
 
 
 0.550
SEH46976.1
Chromosome partitioning protein.
 
 
 0.547
rsmG
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.540
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.