STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH91652.1Hypothetical protein. (373 aa)    
Predicted Functional Partners:
SEI28413.1
Hypothetical protein.
  
     0.756
SEI10523.1
Tetratricopeptide repeat-containing protein.
  
     0.751
SEI08104.1
O-antigen ligase.
  
     0.677
SEI27791.1
Hypothetical protein.
  
     0.671
SEI23570.1
FimV C-terminal domain-containing protein.
  
     0.667
SEI28414.1
Predicted arabinose efflux permease, MFS family.
  
     0.655
SEI22423.1
EAL domain-containing protein.
  
     0.608
SEI10529.1
Phage shock protein A (PspA) family protein.
  
     0.603
SEI07902.1
Fatty acid desaturase.
  
     0.600
GspL
General secretion pathway protein L.
  
     0.591
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.