Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CobG | CobJ | SAMN05192544_101290 | SAMN05192544_101287 | precorrin-3B synthase. | Precorrin-3 methyltransferase. | 0.989 |
CobG | CobM | SAMN05192544_101290 | SAMN05192544_101295 | precorrin-3B synthase. | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | 0.445 |
CobG | SEH92368.1 | SAMN05192544_101290 | SAMN05192544_101288 | precorrin-3B synthase. | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A. | 0.989 |
CobG | SEH92377.1 | SAMN05192544_101290 | SAMN05192544_101289 | precorrin-3B synthase. | precorrin-8X methylmutase. | 0.972 |
CobG | SEH92397.1 | SAMN05192544_101290 | SAMN05192544_101292 | precorrin-3B synthase. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.631 |
CobG | SEH92419.1 | SAMN05192544_101290 | SAMN05192544_101294 | precorrin-3B synthase. | precorrin-6A reductase. | 0.494 |
CobJ | CobG | SAMN05192544_101287 | SAMN05192544_101290 | Precorrin-3 methyltransferase. | precorrin-3B synthase. | 0.989 |
CobJ | CobM | SAMN05192544_101287 | SAMN05192544_101295 | Precorrin-3 methyltransferase. | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | 0.999 |
CobJ | SEH92234.1 | SAMN05192544_101287 | SAMN05192544_101274 | Precorrin-3 methyltransferase. | Cobalt-precorrin 5A hydrolase. | 0.992 |
CobJ | SEH92368.1 | SAMN05192544_101287 | SAMN05192544_101288 | Precorrin-3 methyltransferase. | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A. | 0.999 |
CobJ | SEH92377.1 | SAMN05192544_101287 | SAMN05192544_101289 | Precorrin-3 methyltransferase. | precorrin-8X methylmutase. | 0.997 |
CobJ | SEH92397.1 | SAMN05192544_101287 | SAMN05192544_101292 | Precorrin-3 methyltransferase. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.992 |
CobJ | SEH92419.1 | SAMN05192544_101287 | SAMN05192544_101294 | Precorrin-3 methyltransferase. | precorrin-6A reductase. | 0.989 |
CobJ | cbiD | SAMN05192544_101287 | SAMN05192544_101293 | Precorrin-3 methyltransferase. | cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.998 |
CobJ | cobQ | SAMN05192544_101287 | SAMN05192544_103552 | Precorrin-3 methyltransferase. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.993 |
CobJ | cobS | SAMN05192544_101287 | SAMN05192544_103546 | Precorrin-3 methyltransferase. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.973 |
CobM | CobG | SAMN05192544_101295 | SAMN05192544_101290 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | precorrin-3B synthase. | 0.445 |
CobM | CobJ | SAMN05192544_101295 | SAMN05192544_101287 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | Precorrin-3 methyltransferase. | 0.999 |
CobM | SEH92234.1 | SAMN05192544_101295 | SAMN05192544_101274 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | Cobalt-precorrin 5A hydrolase. | 0.995 |
CobM | SEH92368.1 | SAMN05192544_101295 | SAMN05192544_101288 | Precorrin-4/cobalt-precorrin-4 C11-methyltransferase. | Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A. | 0.942 |
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