STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH98680.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
SEH98700.1
Hypothetical protein.
 
 
   0.904
SEH98669.1
Hypothetical protein.
 
     0.893
SEH98661.1
Hypothetical protein.
 
     0.888
SEH98691.1
Hypothetical protein.
       0.794
SEI09792.1
Hypothetical protein.
 
     0.787
SEI09817.1
Hypothetical protein.
 
     0.559
SEH98709.1
Sigma54 specific transcriptional regulator, Fis family.
 
     0.538
SEH98654.1
Hypothetical protein.
       0.502
SEI09801.1
Hypothetical protein.
 
     0.480
SEI20575.1
GAF domain-containing protein.
  
     0.471
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.