STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI02953.1Histidine transport system permease protein/arginine/ornithine transport system permease protein. (241 aa)    
Predicted Functional Partners:
SEI02947.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 
0.978
SEI02966.1
L-arginine ABC transporter ATP-binding protein.
  
 0.964
SEI02937.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.909
SEI25808.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
 0.859
SEI26558.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
 0.859
SEI12959.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
 0.858
SEH85915.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  
 
  0.851
SEH95793.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  
 
  0.847
SEH39587.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.795
SEH52974.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.795
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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