STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI04305.1Hypothetical protein. (326 aa)    
Predicted Functional Partners:
SEI04313.1
DNA polymerase.
       0.807
RimI
[SSU ribosomal protein S18P]-alanine acetyltransferase.
       0.807
TsaB
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
       0.807
SEH43311.1
Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
  
     0.528
SEI04337.1
Acyl-CoA-binding protein.
       0.527
SEI05948.1
Protein of unknown function.
  
     0.435
SEI28664.1
DNA-binding protein; Belongs to the bacterial histone-like protein family.
  
     0.426
SEI26593.1
Hook-length control protein FliK.
  
     0.411
FliO
Flagellar protein FliO/FliZ.
  
     0.409
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.