Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RimI | SEI04305.1 | SAMN05192544_101749 | SAMN05192544_101747 | [SSU ribosomal protein S18P]-alanine acetyltransferase. | Hypothetical protein. | 0.807 |
RimI | SEI04313.1 | SAMN05192544_101749 | SAMN05192544_101748 | [SSU ribosomal protein S18P]-alanine acetyltransferase. | DNA polymerase. | 0.825 |
RimI | TsaB | SAMN05192544_101749 | SAMN05192544_101750 | [SSU ribosomal protein S18P]-alanine acetyltransferase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.929 |
SEH42175.1 | SEI27383.1 | SAMN05192544_1001396 | SAMN05192544_108717 | Biotin--[acetyl-CoA-carboxylase] ligase; BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.409 |
SEH42175.1 | TsaB | SAMN05192544_1001396 | SAMN05192544_101750 | Biotin--[acetyl-CoA-carboxylase] ligase; BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.656 |
SEH42175.1 | metG | SAMN05192544_1001396 | SAMN05192544_103563 | Biotin--[acetyl-CoA-carboxylase] ligase; BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.544 |
SEI04305.1 | RimI | SAMN05192544_101747 | SAMN05192544_101749 | Hypothetical protein. | [SSU ribosomal protein S18P]-alanine acetyltransferase. | 0.807 |
SEI04305.1 | SEI04313.1 | SAMN05192544_101747 | SAMN05192544_101748 | Hypothetical protein. | DNA polymerase. | 0.807 |
SEI04305.1 | TsaB | SAMN05192544_101747 | SAMN05192544_101750 | Hypothetical protein. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.807 |
SEI04313.1 | RimI | SAMN05192544_101748 | SAMN05192544_101749 | DNA polymerase. | [SSU ribosomal protein S18P]-alanine acetyltransferase. | 0.825 |
SEI04313.1 | SEI04305.1 | SAMN05192544_101748 | SAMN05192544_101747 | DNA polymerase. | Hypothetical protein. | 0.807 |
SEI04313.1 | SEI10221.1 | SAMN05192544_101748 | SAMN05192544_102112 | DNA polymerase. | DNA polymerase. | 0.927 |
SEI04313.1 | TsaB | SAMN05192544_101748 | SAMN05192544_101750 | DNA polymerase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.908 |
SEI04906.1 | SEI27383.1 | SAMN05192544_1017122 | SAMN05192544_108717 | tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Belongs to the SUA5 family. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.636 |
SEI04906.1 | TsaB | SAMN05192544_1017122 | SAMN05192544_101750 | tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Belongs to the SUA5 family. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.703 |
SEI04906.1 | metG | SAMN05192544_1017122 | SAMN05192544_103563 | tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Belongs to the SUA5 family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.575 |
SEI04906.1 | tsaD | SAMN05192544_1017122 | SAMN05192544_109410 | tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Belongs to the SUA5 family. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.665 |
SEI08235.1 | SEI27383.1 | SAMN05192544_1019108 | SAMN05192544_108717 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.689 |
SEI08235.1 | TsaB | SAMN05192544_1019108 | SAMN05192544_101750 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.689 |
SEI08235.1 | tsaD | SAMN05192544_1019108 | SAMN05192544_109410 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.665 |
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