STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI07896.1Transcriptional regulator, DeoR family. (259 aa)    
Predicted Functional Partners:
SEI07870.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.704
PtsP-2
Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family.
 
  
 0.620
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.577
SEI24263.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
   
 0.555
SEI24270.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
   
 0.537
SEI24269.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
   
 0.534
SEI24266.1
Predicted small integral membrane protein.
 
     0.504
SEH43381.1
PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.484
SEH43028.1
PTS N-acetyl-D-glucosamine transporter; PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family.
 
  
 0.465
SEH92920.1
PTS system, nitrogen regulatory IIA component.
 
  
 0.464
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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