node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI04349.1 | SEI12771.1 | SAMN05192544_101752 | SAMN05192544_102386 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | ATP-binding cassette, subfamily F, uup. | 0.689 |
SEI04349.1 | SEI20077.1 | SAMN05192544_101752 | SAMN05192544_103636 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | ATP-dependent DNA helicase RecQ. | 0.424 |
SEI04349.1 | rplC | SAMN05192544_101752 | SAMN05192544_10323 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.764 |
SEI04349.1 | rplD | SAMN05192544_101752 | SAMN05192544_10324 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.748 |
SEI04349.1 | rplT | SAMN05192544_101752 | SAMN05192544_101134 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.470 |
SEI04349.1 | rplU | SAMN05192544_101752 | SAMN05192544_101841 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.570 |
SEI04349.1 | rpsD | SAMN05192544_101752 | SAMN05192544_103229 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.698 |
SEI04349.1 | rpsG | SAMN05192544_101752 | SAMN05192544_111413 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.446 |
SEI04349.1 | rpsO | SAMN05192544_101752 | SAMN05192544_105520 | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.513 |
SEI12771.1 | SEI04349.1 | SAMN05192544_102386 | SAMN05192544_101752 | ATP-binding cassette, subfamily F, uup. | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | 0.689 |
SEI12771.1 | SEI20077.1 | SAMN05192544_102386 | SAMN05192544_103636 | ATP-binding cassette, subfamily F, uup. | ATP-dependent DNA helicase RecQ. | 0.695 |
SEI12771.1 | rhlE | SAMN05192544_102386 | SAMN05192544_101966 | ATP-binding cassette, subfamily F, uup. | ATP-dependent RNA helicase RhlE; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. | 0.701 |
SEI12771.1 | rplC | SAMN05192544_102386 | SAMN05192544_10323 | ATP-binding cassette, subfamily F, uup. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.695 |
SEI12771.1 | rplD | SAMN05192544_102386 | SAMN05192544_10324 | ATP-binding cassette, subfamily F, uup. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.715 |
SEI12771.1 | rplT | SAMN05192544_102386 | SAMN05192544_101134 | ATP-binding cassette, subfamily F, uup. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.690 |
SEI12771.1 | rplU | SAMN05192544_102386 | SAMN05192544_101841 | ATP-binding cassette, subfamily F, uup. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.703 |
SEI12771.1 | rpsD | SAMN05192544_102386 | SAMN05192544_103229 | ATP-binding cassette, subfamily F, uup. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.691 |
SEI12771.1 | rpsG | SAMN05192544_102386 | SAMN05192544_111413 | ATP-binding cassette, subfamily F, uup. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.697 |
SEI12771.1 | rpsO | SAMN05192544_102386 | SAMN05192544_105520 | ATP-binding cassette, subfamily F, uup. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.701 |
SEI20077.1 | SEI04349.1 | SAMN05192544_103636 | SAMN05192544_101752 | ATP-dependent DNA helicase RecQ. | Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family. | 0.424 |