STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI14417.1Conjugal transfer/type IV secretion protein DotA/TraY. (739 aa)    
Predicted Functional Partners:
SEI14423.1
Intracellular multiplication protein IcmB.
 
     0.904
SEI14451.1
Intracellular multiplication protein IcmK.
 
     0.835
SEI28335.1
Intracellular multiplication protein IcmB.
 
     0.779
SEI28285.1
Defect in organelle trafficking protein DotC.
 
     0.774
SEI14488.1
Defect in organelle trafficking protein DotC.
 
     0.769
SEI27943.1
Intracellular multiplication protein IcmO.
 
     0.767
SEI28341.1
Intracellular multiplication protein IcmK.
 
     0.766
SEI28342.1
Intracellular multiplication protein IcmL.
 
     0.766
SEI14376.1
Intracellular multiplication protein IcmO.
 
     0.737
SEI27940.1
Intracellular multiplication protein IcmP.
  
     0.732
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.