STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI15445.1Glycine/D-amino acid oxidase. (425 aa)    
Predicted Functional Partners:
SEI15451.1
Acetyltransferase (GNAT) domain-containing protein.
 
     0.833
SEI15441.1
Acyl-CoA reductase.
 
    0.812
SEH47627.1
2-haloacid dehalogenase.
 
  
 0.756
SEI15410.1
2-haloacid dehalogenase.
 
  
 0.756
SEH47275.1
Predicted N-acetyltransferase YhbS.
  
     0.749
SEH47653.1
L-amino acid N-acyltransferase YncA.
  
     0.748
SEI15417.1
Predicted N-acetyltransferase YhbS.
  
     0.746
SEI09621.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
  
 
 0.699
SEI26698.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
 0.699
SEI15449.1
Glycine/D-amino acid oxidase.
 
    
0.697
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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