STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI18902.1Hypothetical protein. (58 aa)    
Predicted Functional Partners:
SEI18892.1
Type IV secretion system protein VirB10.
       0.773
SEI18895.1
Type IV secretion system protein VirB9.
       0.773
SEI18898.1
Type IV secretion system protein VirB8.
       0.773
SEI18888.1
Hypothetical protein.
       0.718
SEI18875.1
Hypothetical protein.
       0.563
SEI18878.1
Protein of unknown function.
       0.563
SEI18881.1
Hypothetical protein.
       0.563
VirB11
Type IV secretion system protein VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
       0.563
SEI18906.1
Type IV secretion system protein VirB6.
       0.472
SEI18869.1
Hypothetical protein.
       0.455
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.