Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH41077.1 | SEI19696.1 | SAMN05192544_1001299 | SAMN05192544_103532 | Hypothetical protein. | Cytochrome c. | 0.532 |
SEH41077.1 | SEI27876.1 | SAMN05192544_1001299 | SAMN05192544_109926 | Hypothetical protein. | Carbonic anhydrase. | 0.486 |
SEI19696.1 | SEH41077.1 | SAMN05192544_103532 | SAMN05192544_1001299 | Cytochrome c. | Hypothetical protein. | 0.532 |
SEI19696.1 | SEI27663.1 | SAMN05192544_103532 | SAMN05192544_109415 | Cytochrome c. | Choline monooxygenase. | 0.521 |
SEI19696.1 | SEI27876.1 | SAMN05192544_103532 | SAMN05192544_109926 | Cytochrome c. | Carbonic anhydrase. | 0.417 |
SEI19696.1 | SEI28615.1 | SAMN05192544_103532 | SAMN05192544_11474 | Cytochrome c. | DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit. | 0.486 |
SEI19696.1 | SoxC | SAMN05192544_103532 | SAMN05192544_1010147 | Cytochrome c. | Sulfane dehydrogenase subunit SoxC. | 0.486 |
SEI19696.1 | ilvD | SAMN05192544_103532 | SAMN05192544_103533 | Cytochrome c. | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | 0.484 |
SEI27663.1 | SEI19696.1 | SAMN05192544_109415 | SAMN05192544_103532 | Choline monooxygenase. | Cytochrome c. | 0.521 |
SEI27876.1 | SEH41077.1 | SAMN05192544_109926 | SAMN05192544_1001299 | Carbonic anhydrase. | Hypothetical protein. | 0.486 |
SEI27876.1 | SEI19696.1 | SAMN05192544_109926 | SAMN05192544_103532 | Carbonic anhydrase. | Cytochrome c. | 0.417 |
SEI28615.1 | SEI19696.1 | SAMN05192544_11474 | SAMN05192544_103532 | DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit. | Cytochrome c. | 0.486 |
SoxC | SEI19696.1 | SAMN05192544_1010147 | SAMN05192544_103532 | Sulfane dehydrogenase subunit SoxC. | Cytochrome c. | 0.486 |
ilvD | SEI19696.1 | SAMN05192544_103533 | SAMN05192544_103532 | Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family. | Cytochrome c. | 0.484 |