Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI02499.1 | SEI19727.1 | SAMN05192544_101667 | SAMN05192544_103542 | Hypothetical protein. | Vitamin B12 transporter. | 0.666 |
SEI04686.1 | SEI19727.1 | SAMN05192544_101796 | SAMN05192544_103542 | Hypothetical protein. | Vitamin B12 transporter. | 0.749 |
SEI19727.1 | SEI02499.1 | SAMN05192544_103542 | SAMN05192544_101667 | Vitamin B12 transporter. | Hypothetical protein. | 0.666 |
SEI19727.1 | SEI04686.1 | SAMN05192544_103542 | SAMN05192544_101796 | Vitamin B12 transporter. | Hypothetical protein. | 0.749 |
SEI19727.1 | SEI19731.1 | SAMN05192544_103542 | SAMN05192544_103543 | Vitamin B12 transporter. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.873 |
SEI19727.1 | SEI19735.1 | SAMN05192544_103542 | SAMN05192544_103544 | Vitamin B12 transporter. | Iron complex transport system ATP-binding protein. | 0.874 |
SEI19727.1 | SEI20462.1 | SAMN05192544_103542 | SAMN05192544_103730 | Vitamin B12 transporter. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.763 |
SEI19727.1 | SEI24036.1 | SAMN05192544_103542 | SAMN05192544_105055 | Vitamin B12 transporter. | Protein TonB. | 0.720 |
SEI19727.1 | SEI24259.1 | SAMN05192544_103542 | SAMN05192544_105141 | Vitamin B12 transporter. | Catecholate siderophore receptor. | 0.703 |
SEI19727.1 | SEI26769.1 | SAMN05192544_103542 | SAMN05192544_107610 | Vitamin B12 transporter. | Hypothetical protein. | 0.666 |
SEI19727.1 | TolA | SAMN05192544_103542 | SAMN05192544_104332 | Vitamin B12 transporter. | Cell division and transport-associated protein TolA. | 0.782 |
SEI19727.1 | cobT | SAMN05192544_103542 | SAMN05192544_103545 | Vitamin B12 transporter. | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.704 |
SEI19731.1 | SEI19727.1 | SAMN05192544_103543 | SAMN05192544_103542 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Vitamin B12 transporter. | 0.873 |
SEI19731.1 | SEI19735.1 | SAMN05192544_103543 | SAMN05192544_103544 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Iron complex transport system ATP-binding protein. | 0.990 |
SEI19731.1 | SEI24259.1 | SAMN05192544_103543 | SAMN05192544_105141 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Catecholate siderophore receptor. | 0.416 |
SEI19731.1 | cobT | SAMN05192544_103543 | SAMN05192544_103545 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.705 |
SEI19735.1 | SEI19727.1 | SAMN05192544_103544 | SAMN05192544_103542 | Iron complex transport system ATP-binding protein. | Vitamin B12 transporter. | 0.874 |
SEI19735.1 | SEI19731.1 | SAMN05192544_103544 | SAMN05192544_103543 | Iron complex transport system ATP-binding protein. | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.990 |
SEI19735.1 | SEI24259.1 | SAMN05192544_103544 | SAMN05192544_105141 | Iron complex transport system ATP-binding protein. | Catecholate siderophore receptor. | 0.424 |
SEI19735.1 | cobT | SAMN05192544_103544 | SAMN05192544_103545 | Iron complex transport system ATP-binding protein. | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.693 |
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