Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH38659.1 | SEI19771.1 | SAMN05192544_100175 | SAMN05192544_103555 | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | Chromosome partitioning protein. | 0.470 |
SEH86645.1 | SEI19771.1 | SAMN05192544_1010201 | SAMN05192544_103555 | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | Chromosome partitioning protein. | 0.470 |
SEI14617.1 | SEI19771.1 | SAMN05192544_102576 | SAMN05192544_103555 | Hypothetical protein. | Chromosome partitioning protein. | 0.470 |
SEI18975.1 | SEI19771.1 | SAMN05192544_103352 | SAMN05192544_103555 | Chromosome partitioning protein, ParB family. | Chromosome partitioning protein. | 0.563 |
SEI19768.1 | SEI19771.1 | SAMN05192544_103554 | SAMN05192544_103555 | Uncharacterized domain 1-containing protein. | Chromosome partitioning protein. | 0.490 |
SEI19771.1 | SEH38659.1 | SAMN05192544_103555 | SAMN05192544_100175 | Chromosome partitioning protein. | Chromosome segregation DNA-binding protein; Belongs to the ParB family. | 0.470 |
SEI19771.1 | SEH86645.1 | SAMN05192544_103555 | SAMN05192544_1010201 | Chromosome partitioning protein. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.470 |
SEI19771.1 | SEI14617.1 | SAMN05192544_103555 | SAMN05192544_102576 | Chromosome partitioning protein. | Hypothetical protein. | 0.470 |
SEI19771.1 | SEI18975.1 | SAMN05192544_103555 | SAMN05192544_103352 | Chromosome partitioning protein. | Chromosome partitioning protein, ParB family. | 0.563 |
SEI19771.1 | SEI19768.1 | SAMN05192544_103555 | SAMN05192544_103554 | Chromosome partitioning protein. | Uncharacterized domain 1-containing protein. | 0.490 |
SEI19771.1 | SEI28674.1 | SAMN05192544_103555 | SAMN05192544_11613 | Chromosome partitioning protein. | Plasmid replication initiator protein. | 0.749 |
SEI19771.1 | TraJ | SAMN05192544_103555 | SAMN05192544_111816 | Chromosome partitioning protein. | Defect in organelle trafficking protein DotB. | 0.673 |
SEI19771.1 | VirB11 | SAMN05192544_103555 | SAMN05192544_103322 | Chromosome partitioning protein. | Type IV secretion system protein VirB11; Part of the Type IV secretion system. Belongs to the GSP E family. | 0.582 |
SEI19771.1 | parE | SAMN05192544_103555 | SAMN05192544_102385 | Chromosome partitioning protein. | DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. | 0.682 |
SEI19771.1 | tal | SAMN05192544_103555 | SAMN05192544_102364 | Chromosome partitioning protein. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.576 |
SEI28674.1 | SEI19771.1 | SAMN05192544_11613 | SAMN05192544_103555 | Plasmid replication initiator protein. | Chromosome partitioning protein. | 0.749 |
SEI28674.1 | TraJ | SAMN05192544_11613 | SAMN05192544_111816 | Plasmid replication initiator protein. | Defect in organelle trafficking protein DotB. | 0.644 |
SEI28674.1 | parE | SAMN05192544_11613 | SAMN05192544_102385 | Plasmid replication initiator protein. | DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. | 0.656 |
TraJ | SEI19771.1 | SAMN05192544_111816 | SAMN05192544_103555 | Defect in organelle trafficking protein DotB. | Chromosome partitioning protein. | 0.673 |
TraJ | SEI28674.1 | SAMN05192544_111816 | SAMN05192544_11613 | Defect in organelle trafficking protein DotB. | Plasmid replication initiator protein. | 0.644 |
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