Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PgaA | SEH70513.1 | SAMN05192544_104654 | SAMN05192544_1006183 | Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. | Uncharacterized membrane protein YccC. | 0.584 |
PgaA | SEI11932.1 | SAMN05192544_104654 | SAMN05192544_1022107 | Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. | Multidrug resistance protein MdtO. | 0.617 |
PgaA | SEI21248.1 | SAMN05192544_104654 | SAMN05192544_103948 | Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. | Fusaric acid resistance protein-like. | 0.627 |
PgaA | SEI22319.1 | SAMN05192544_104654 | SAMN05192544_104312 | Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. | Right handed beta helix region. | 0.641 |
PgaA | SEI25862.1 | SAMN05192544_104654 | SAMN05192544_106316 | Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. | N-terminal half of MaoC dehydratase. | 0.702 |
PgaA | SEI26074.1 | SAMN05192544_104654 | SAMN05192544_106548 | Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. | Protein of unknown function. | 0.462 |
SEH70513.1 | PgaA | SAMN05192544_1006183 | SAMN05192544_104654 | Uncharacterized membrane protein YccC. | Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA. | 0.584 |
SEH70513.1 | SEI11932.1 | SAMN05192544_1006183 | SAMN05192544_1022107 | Uncharacterized membrane protein YccC. | Multidrug resistance protein MdtO. | 0.711 |
SEH70513.1 | SEI21248.1 | SAMN05192544_1006183 | SAMN05192544_103948 | Uncharacterized membrane protein YccC. | Fusaric acid resistance protein-like. | 0.726 |
SEH70513.1 | SEI22319.1 | SAMN05192544_1006183 | SAMN05192544_104312 | Uncharacterized membrane protein YccC. | Right handed beta helix region. | 0.650 |
SEH70513.1 | SEI25862.1 | SAMN05192544_1006183 | SAMN05192544_106316 | Uncharacterized membrane protein YccC. | N-terminal half of MaoC dehydratase. | 0.668 |
SEH70513.1 | SEI26072.1 | SAMN05192544_1006183 | SAMN05192544_106547 | Uncharacterized membrane protein YccC. | SAM domain (Sterile alpha motif). | 0.434 |
SEH70513.1 | SEI26074.1 | SAMN05192544_1006183 | SAMN05192544_106548 | Uncharacterized membrane protein YccC. | Protein of unknown function. | 0.512 |
SEH70513.1 | SEI27052.1 | SAMN05192544_1006183 | SAMN05192544_108111 | Uncharacterized membrane protein YccC. | Protein of unknown function. | 0.488 |
SEH86178.1 | SEI11932.1 | SAMN05192544_1010166 | SAMN05192544_1022107 | Hypothetical protein. | Multidrug resistance protein MdtO. | 0.463 |
SEH86178.1 | SEI21248.1 | SAMN05192544_1010166 | SAMN05192544_103948 | Hypothetical protein. | Fusaric acid resistance protein-like. | 0.627 |
SEH86178.1 | SEI22319.1 | SAMN05192544_1010166 | SAMN05192544_104312 | Hypothetical protein. | Right handed beta helix region. | 0.543 |
SEH86178.1 | SEI25862.1 | SAMN05192544_1010166 | SAMN05192544_106316 | Hypothetical protein. | N-terminal half of MaoC dehydratase. | 0.469 |
SEH86178.1 | SEI26072.1 | SAMN05192544_1010166 | SAMN05192544_106547 | Hypothetical protein. | SAM domain (Sterile alpha motif). | 0.572 |
SEH86178.1 | SEI26074.1 | SAMN05192544_1010166 | SAMN05192544_106548 | Hypothetical protein. | Protein of unknown function. | 0.440 |
page 1 of 4