Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BetC | SEH95361.1 | SAMN05192544_101215 | SAMN05192544_1013117 | Choline-sulfatase. | Protein of unknown function. | 0.431 |
BetC | SEH95535.1 | SAMN05192544_101215 | SAMN05192544_1013132 | Choline-sulfatase. | Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family. | 0.404 |
BetC | SEI21274.1 | SAMN05192544_101215 | SAMN05192544_103956 | Choline-sulfatase. | Hypothetical protein. | 0.603 |
BetC | SEI21277.1 | SAMN05192544_101215 | SAMN05192544_103957 | Choline-sulfatase. | Hypothetical protein. | 0.497 |
BetC | SEI26052.1 | SAMN05192544_101215 | SAMN05192544_106532 | Choline-sulfatase. | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein. | 0.490 |
SEH63783.1 | SEH95361.1 | SAMN05192544_100561 | SAMN05192544_1013117 | NmrA-like family protein. | Protein of unknown function. | 0.563 |
SEH63783.1 | SEH95535.1 | SAMN05192544_100561 | SAMN05192544_1013132 | NmrA-like family protein. | Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family. | 0.465 |
SEH63783.1 | SEI21274.1 | SAMN05192544_100561 | SAMN05192544_103956 | NmrA-like family protein. | Hypothetical protein. | 0.616 |
SEH63783.1 | SEI26052.1 | SAMN05192544_100561 | SAMN05192544_106532 | NmrA-like family protein. | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein. | 0.554 |
SEH63783.1 | SEI26402.1 | SAMN05192544_100561 | SAMN05192544_107018 | NmrA-like family protein. | 4-cresol dehydrogenase (hydroxylating). | 0.563 |
SEH95361.1 | BetC | SAMN05192544_1013117 | SAMN05192544_101215 | Protein of unknown function. | Choline-sulfatase. | 0.431 |
SEH95361.1 | SEH63783.1 | SAMN05192544_1013117 | SAMN05192544_100561 | Protein of unknown function. | NmrA-like family protein. | 0.563 |
SEH95361.1 | SEH95535.1 | SAMN05192544_1013117 | SAMN05192544_1013132 | Protein of unknown function. | Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family. | 0.701 |
SEH95361.1 | SEI21274.1 | SAMN05192544_1013117 | SAMN05192544_103956 | Protein of unknown function. | Hypothetical protein. | 0.744 |
SEH95361.1 | SEI21277.1 | SAMN05192544_1013117 | SAMN05192544_103957 | Protein of unknown function. | Hypothetical protein. | 0.674 |
SEH95361.1 | SEI26052.1 | SAMN05192544_1013117 | SAMN05192544_106532 | Protein of unknown function. | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein. | 0.631 |
SEH95361.1 | SEI26402.1 | SAMN05192544_1013117 | SAMN05192544_107018 | Protein of unknown function. | 4-cresol dehydrogenase (hydroxylating). | 0.577 |
SEH95535.1 | BetC | SAMN05192544_1013132 | SAMN05192544_101215 | Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family. | Choline-sulfatase. | 0.404 |
SEH95535.1 | SEH63783.1 | SAMN05192544_1013132 | SAMN05192544_100561 | Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family. | NmrA-like family protein. | 0.465 |
SEH95535.1 | SEH95361.1 | SAMN05192544_1013132 | SAMN05192544_1013117 | Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family. | Protein of unknown function. | 0.701 |
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