Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH43353.1 | SEI21567.1 | SAMN05192544_1001500 | SAMN05192544_104065 | Hypothetical protein. | Protein ImuA. | 0.455 |
SEI20376.1 | SEI21567.1 | SAMN05192544_10373 | SAMN05192544_104065 | Protein ImuB. | Protein ImuA. | 0.917 |
SEI20376.1 | SEI28227.1 | SAMN05192544_10373 | SAMN05192544_111511 | Protein ImuB. | SOS-response transcriptional repressor, LexA; Belongs to the peptidase S24 family. | 0.743 |
SEI20376.1 | dnaE2 | SAMN05192544_10373 | SAMN05192544_10374 | Protein ImuB. | Error-prone DNA polymerase, DnaE-like; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.970 |
SEI20376.1 | dnaE2-2 | SAMN05192544_10373 | SAMN05192544_104067 | Protein ImuB. | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.872 |
SEI21565.1 | SEI21567.1 | SAMN05192544_104064 | SAMN05192544_104065 | Hypothetical protein. | Protein ImuA. | 0.515 |
SEI21565.1 | SEI21569.1 | SAMN05192544_104064 | SAMN05192544_104066 | Hypothetical protein. | Protein ImuB. | 0.515 |
SEI21565.1 | SEI21572.1 | SAMN05192544_104064 | SAMN05192544_104068 | Hypothetical protein. | Protein of unknown function. | 0.477 |
SEI21565.1 | dnaE2-2 | SAMN05192544_104064 | SAMN05192544_104067 | Hypothetical protein. | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.515 |
SEI21567.1 | SEH43353.1 | SAMN05192544_104065 | SAMN05192544_1001500 | Protein ImuA. | Hypothetical protein. | 0.455 |
SEI21567.1 | SEI20376.1 | SAMN05192544_104065 | SAMN05192544_10373 | Protein ImuA. | Protein ImuB. | 0.917 |
SEI21567.1 | SEI21565.1 | SAMN05192544_104065 | SAMN05192544_104064 | Protein ImuA. | Hypothetical protein. | 0.515 |
SEI21567.1 | SEI21569.1 | SAMN05192544_104065 | SAMN05192544_104066 | Protein ImuA. | Protein ImuB. | 0.980 |
SEI21567.1 | SEI21572.1 | SAMN05192544_104065 | SAMN05192544_104068 | Protein ImuA. | Protein of unknown function. | 0.709 |
SEI21567.1 | SEI21574.1 | SAMN05192544_104065 | SAMN05192544_104069 | Protein ImuA. | Hypothetical protein. | 0.467 |
SEI21567.1 | SEI28227.1 | SAMN05192544_104065 | SAMN05192544_111511 | Protein ImuA. | SOS-response transcriptional repressor, LexA; Belongs to the peptidase S24 family. | 0.530 |
SEI21567.1 | dinB | SAMN05192544_104065 | SAMN05192544_1012111 | Protein ImuA. | DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.656 |
SEI21567.1 | dnaE2 | SAMN05192544_104065 | SAMN05192544_10374 | Protein ImuA. | Error-prone DNA polymerase, DnaE-like; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.853 |
SEI21567.1 | dnaE2-2 | SAMN05192544_104065 | SAMN05192544_104067 | Protein ImuA. | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.965 |
SEI21569.1 | SEI21565.1 | SAMN05192544_104066 | SAMN05192544_104064 | Protein ImuB. | Hypothetical protein. | 0.515 |
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