STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI21713.1Amino acid ABC transporter membrane protein 2, PAAT family. (215 aa)    
Predicted Functional Partners:
SEI21710.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
  
  0.994
SEI21715.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  
 
0.968
SEI21718.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.910
SEH88589.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.875
artP
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 
 0.869
glnQ
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.867
artP-2
L-glutamate ABC transporter ATP-binding protein.
 
 
 0.866
SEI17253.1
Polar amino acid transport system ATP-binding protein.
 
 
 0.866
SEI25814.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 
 0.866
SEI26935.1
L-glutamate ABC transporter ATP-binding protein.
 
 
 0.866
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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