STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI21983.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
SEI21491.1
Outer membrane protein (porin).
  
    0.649
SEH71031.1
Acetyltransferase (GNAT) family protein.
 
   
 0.643
SEH78632.1
Acetyltransferase (GNAT) family protein.
 
   
 0.632
TreS
Trehalose synthase.
  
 0.619
SEI02449.1
Outer membrane protein (porin).
  
    0.617
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.617
SEI28575.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
   
 0.617
SEH99944.1
Methylamine utilisation protein MauE.
 
   
 0.568
SEI21980.1
Transposase (or an inactivated derivative).
       0.558
SEH94756.1
Putative ABC transport system permease protein.
 
     0.545
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.