Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH38640.1 | SEH47068.1 | SAMN05192544_100173 | SAMN05192544_1002176 | ATP synthase protein I. | Outer membrane protein (porin). | 0.741 |
SEH38640.1 | SEH77564.1 | SAMN05192544_100173 | SAMN05192544_100875 | ATP synthase protein I. | Outer membrane protein (porin). | 0.733 |
SEH38640.1 | SEH80465.1 | SAMN05192544_100173 | SAMN05192544_100928 | ATP synthase protein I. | Transposase. | 0.705 |
SEH38640.1 | SEI05948.1 | SAMN05192544_100173 | SAMN05192544_101827 | ATP synthase protein I. | Protein of unknown function. | 0.650 |
SEH38640.1 | SEI08104.1 | SAMN05192544_100173 | SAMN05192544_101991 | ATP synthase protein I. | O-antigen ligase. | 0.768 |
SEH38640.1 | SEI10523.1 | SAMN05192544_100173 | SAMN05192544_102157 | ATP synthase protein I. | Tetratricopeptide repeat-containing protein. | 0.720 |
SEH38640.1 | SEI22050.1 | SAMN05192544_100173 | SAMN05192544_104234 | ATP synthase protein I. | Transcriptional regulator, MarR family. | 0.636 |
SEH38640.1 | SEI25271.1 | SAMN05192544_100173 | SAMN05192544_105744 | ATP synthase protein I. | Putative transposase. | 0.699 |
SEH38640.1 | SEI27791.1 | SAMN05192544_100173 | SAMN05192544_109723 | ATP synthase protein I. | Hypothetical protein. | 0.654 |
SEH38640.1 | SEI28225.1 | SAMN05192544_100173 | SAMN05192544_11159 | ATP synthase protein I. | Protein of unknown function. | 0.677 |
SEH47068.1 | SEH38640.1 | SAMN05192544_1002176 | SAMN05192544_100173 | Outer membrane protein (porin). | ATP synthase protein I. | 0.741 |
SEH47068.1 | SEH77564.1 | SAMN05192544_1002176 | SAMN05192544_100875 | Outer membrane protein (porin). | Outer membrane protein (porin). | 0.546 |
SEH47068.1 | SEH80465.1 | SAMN05192544_1002176 | SAMN05192544_100928 | Outer membrane protein (porin). | Transposase. | 0.637 |
SEH47068.1 | SEI05948.1 | SAMN05192544_1002176 | SAMN05192544_101827 | Outer membrane protein (porin). | Protein of unknown function. | 0.723 |
SEH47068.1 | SEI08104.1 | SAMN05192544_1002176 | SAMN05192544_101991 | Outer membrane protein (porin). | O-antigen ligase. | 0.764 |
SEH47068.1 | SEI10523.1 | SAMN05192544_1002176 | SAMN05192544_102157 | Outer membrane protein (porin). | Tetratricopeptide repeat-containing protein. | 0.727 |
SEH47068.1 | SEI22050.1 | SAMN05192544_1002176 | SAMN05192544_104234 | Outer membrane protein (porin). | Transcriptional regulator, MarR family. | 0.696 |
SEH47068.1 | SEI25271.1 | SAMN05192544_1002176 | SAMN05192544_105744 | Outer membrane protein (porin). | Putative transposase. | 0.711 |
SEH47068.1 | SEI27791.1 | SAMN05192544_1002176 | SAMN05192544_109723 | Outer membrane protein (porin). | Hypothetical protein. | 0.679 |
SEH47068.1 | SEI28225.1 | SAMN05192544_1002176 | SAMN05192544_11159 | Outer membrane protein (porin). | Protein of unknown function. | 0.475 |
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