Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH38640.1 | SEH39711.1 | SAMN05192544_100173 | SAMN05192544_1001170 | ATP synthase protein I. | Thioredoxin. | 0.467 |
SEH38640.1 | SEH47068.1 | SAMN05192544_100173 | SAMN05192544_1002176 | ATP synthase protein I. | Outer membrane protein (porin). | 0.741 |
SEH38640.1 | SEH48985.1 | SAMN05192544_100173 | SAMN05192544_1002349 | ATP synthase protein I. | Outer membrane protein (porin). | 0.714 |
SEH38640.1 | SEH51997.1 | SAMN05192544_100173 | SAMN05192544_100330 | ATP synthase protein I. | Outer membrane protein (porin). | 0.715 |
SEH38640.1 | SEH77564.1 | SAMN05192544_100173 | SAMN05192544_100875 | ATP synthase protein I. | Outer membrane protein (porin). | 0.733 |
SEH38640.1 | SEI04144.1 | SAMN05192544_100173 | SAMN05192544_101729 | ATP synthase protein I. | ZipA, C-terminal FtsZ-binding domain; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | 0.756 |
SEH38640.1 | SEI13762.1 | SAMN05192544_100173 | SAMN05192544_102481 | ATP synthase protein I. | Protein of unknown function. | 0.772 |
SEH38640.1 | SEI22057.1 | SAMN05192544_100173 | SAMN05192544_104237 | ATP synthase protein I. | Hypothetical protein. | 0.766 |
SEH39711.1 | SEH38640.1 | SAMN05192544_1001170 | SAMN05192544_100173 | Thioredoxin. | ATP synthase protein I. | 0.467 |
SEH39711.1 | SEH47068.1 | SAMN05192544_1001170 | SAMN05192544_1002176 | Thioredoxin. | Outer membrane protein (porin). | 0.749 |
SEH39711.1 | SEH48985.1 | SAMN05192544_1001170 | SAMN05192544_1002349 | Thioredoxin. | Outer membrane protein (porin). | 0.777 |
SEH39711.1 | SEH51997.1 | SAMN05192544_1001170 | SAMN05192544_100330 | Thioredoxin. | Outer membrane protein (porin). | 0.771 |
SEH39711.1 | SEH77564.1 | SAMN05192544_1001170 | SAMN05192544_100875 | Thioredoxin. | Outer membrane protein (porin). | 0.752 |
SEH39711.1 | SEH88702.1 | SAMN05192544_1001170 | SAMN05192544_101168 | Thioredoxin. | Beta-barrel assembly machine subunit BamC. | 0.547 |
SEH39711.1 | SEI04144.1 | SAMN05192544_1001170 | SAMN05192544_101729 | Thioredoxin. | ZipA, C-terminal FtsZ-binding domain; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. | 0.615 |
SEH39711.1 | SEI13762.1 | SAMN05192544_1001170 | SAMN05192544_102481 | Thioredoxin. | Protein of unknown function. | 0.572 |
SEH39711.1 | SEI22057.1 | SAMN05192544_1001170 | SAMN05192544_104237 | Thioredoxin. | Hypothetical protein. | 0.779 |
SEH47068.1 | SEH38640.1 | SAMN05192544_1002176 | SAMN05192544_100173 | Outer membrane protein (porin). | ATP synthase protein I. | 0.741 |
SEH47068.1 | SEH39711.1 | SAMN05192544_1002176 | SAMN05192544_1001170 | Outer membrane protein (porin). | Thioredoxin. | 0.749 |
SEH47068.1 | SEH48985.1 | SAMN05192544_1002176 | SAMN05192544_1002349 | Outer membrane protein (porin). | Outer membrane protein (porin). | 0.655 |
page 1 of 5