STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GlnA-2Glutamine synthetase. (501 aa)    
Predicted Functional Partners:
SEI18557.1
Glutamate synthase (NADH) large subunit.
  
 
 0.975
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
 
 
 0.949
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
 
 
 0.940
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
  
 0.934
gltD
Glutamate synthase (NADH) small subunit.
  
 
 0.918
SEI06616.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.916
SEI09787.1
Glutamate dehydrogenase (NAD).
     
 0.913
SEH64944.1
Aliphatic nitrilase.
    
 0.908
NirD
Assimilatory nitrite reductase (NAD(P)H) small subunit.
     
 0.908
SEI22990.1
Aliphatic nitrilase.
    
 0.908
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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