Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Aph(3')-I | SEI19679.1 | SAMN05192544_11841 | SAMN05192544_103526 | Aminoglycoside 3'-phosphotransferase-1. | Beta-lactamase class A. | 0.409 |
Aph(3')-I | SEI23133.1 | SAMN05192544_11841 | SAMN05192544_104619 | Aminoglycoside 3'-phosphotransferase-1. | Beta-lactamase class A. | 0.417 |
SEH53129.1 | SEI19679.1 | SAMN05192544_1003141 | SAMN05192544_103526 | Penicillin amidase. | Beta-lactamase class A. | 0.900 |
SEH53129.1 | SEI23133.1 | SAMN05192544_1003141 | SAMN05192544_104619 | Penicillin amidase. | Beta-lactamase class A. | 0.900 |
SEI19679.1 | Aph(3')-I | SAMN05192544_103526 | SAMN05192544_11841 | Beta-lactamase class A. | Aminoglycoside 3'-phosphotransferase-1. | 0.409 |
SEI19679.1 | SEH53129.1 | SAMN05192544_103526 | SAMN05192544_1003141 | Beta-lactamase class A. | Penicillin amidase. | 0.900 |
SEI19679.1 | SEI23133.1 | SAMN05192544_103526 | SAMN05192544_104619 | Beta-lactamase class A. | Beta-lactamase class A. | 0.908 |
SEI23128.1 | SEI23131.1 | SAMN05192544_104617 | SAMN05192544_104618 | Cupin domain protein. | Beta-lactamase class C. | 0.792 |
SEI23128.1 | SEI23133.1 | SAMN05192544_104617 | SAMN05192544_104619 | Cupin domain protein. | Beta-lactamase class A. | 0.727 |
SEI23128.1 | SEI23135.1 | SAMN05192544_104617 | SAMN05192544_104620 | Cupin domain protein. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.536 |
SEI23131.1 | SEI23128.1 | SAMN05192544_104618 | SAMN05192544_104617 | Beta-lactamase class C. | Cupin domain protein. | 0.792 |
SEI23131.1 | SEI23133.1 | SAMN05192544_104618 | SAMN05192544_104619 | Beta-lactamase class C. | Beta-lactamase class A. | 0.758 |
SEI23131.1 | SEI23135.1 | SAMN05192544_104618 | SAMN05192544_104620 | Beta-lactamase class C. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.526 |
SEI23133.1 | Aph(3')-I | SAMN05192544_104619 | SAMN05192544_11841 | Beta-lactamase class A. | Aminoglycoside 3'-phosphotransferase-1. | 0.417 |
SEI23133.1 | SEH53129.1 | SAMN05192544_104619 | SAMN05192544_1003141 | Beta-lactamase class A. | Penicillin amidase. | 0.900 |
SEI23133.1 | SEI19679.1 | SAMN05192544_104619 | SAMN05192544_103526 | Beta-lactamase class A. | Beta-lactamase class A. | 0.908 |
SEI23133.1 | SEI23128.1 | SAMN05192544_104619 | SAMN05192544_104617 | Beta-lactamase class A. | Cupin domain protein. | 0.727 |
SEI23133.1 | SEI23131.1 | SAMN05192544_104619 | SAMN05192544_104618 | Beta-lactamase class A. | Beta-lactamase class C. | 0.758 |
SEI23133.1 | SEI23135.1 | SAMN05192544_104619 | SAMN05192544_104620 | Beta-lactamase class A. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.664 |
SEI23135.1 | SEI23128.1 | SAMN05192544_104620 | SAMN05192544_104617 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Cupin domain protein. | 0.536 |
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