STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI24259.1Catecholate siderophore receptor. (745 aa)    
Predicted Functional Partners:
SEI24256.1
PKHD-type hydroxylase.
 
  
 0.970
SEI19727.1
Vitamin B12 transporter.
  
   
 0.703
SEI23386.1
Prolyl 4-hydroxylase.
  
  
 0.694
SEI00258.1
High-affinity iron transporter.
  
  
 0.611
SEI20426.1
High-affinity iron transporter.
  
  
 0.611
SEI16917.1
acetoacetyl-CoA synthetase.
  
  
 0.606
SEH55136.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
  
 0.538
SEI23983.1
Iron complex outermembrane recepter protein.
  
  
 0.529
SEI28446.1
Iron complex outermembrane recepter protein.
 
  
 0.519
SEH55149.1
Amino acid adenylation domain-containing protein.
  
  
 0.517
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.