STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI24608.1Acetoin utilization deacetylase AcuC. (292 aa)    
Predicted Functional Partners:
SEH40948.1
SNF2 family N-terminal domain-containing protein.
    
 0.800
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs.
   
 
 0.800
SEI18135.1
Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 
 0.783
SEI25897.1
Monoamine oxidase.
   
 0.774
SEI24606.1
Enoyl-CoA hydratase/carnithine racemase.
   
 
 0.693
SEI26173.1
Signal transduction histidine kinase.
 
 
 0.661
SEI02869.1
WD40 repeat.
  
 
 0.657
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.633
SEI23840.1
Helicase conserved C-terminal domain-containing protein.
    
 0.624
SEI28188.1
Superfamily II DNA or RNA helicase, SNF2 family.
    
 0.624
Your Current Organism:
Paraburkholderia hospita
NCBI taxonomy Id: 169430
Other names: Burkholderia hospita, Burkholderia hospita Goris et al. 2003, Burkholderia sp. LMG 20598, CCUG 43658, CCUG 43661, CIP 107793, DSM 17164, LMG 20598, LMG:20598, P. hospita, Paraburkholderia hospita (Goris et al. 2003) Sawana et al. 2015, strain Goris R-8366, strain R-8366
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.