Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH71161.1 | SEI24847.1 | SAMN05192544_1006235 | SAMN05192544_105446 | LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.555 |
SEH91532.1 | SEI24847.1 | SAMN05192544_101214 | SAMN05192544_105446 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.448 |
SEI24844.1 | SEI24847.1 | SAMN05192544_105445 | SAMN05192544_105446 | Drug resistance transporter, EmrB/QacA subfamily. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.564 |
SEI24847.1 | SEH71161.1 | SAMN05192544_105446 | SAMN05192544_1006235 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.555 |
SEI24847.1 | SEH91532.1 | SAMN05192544_105446 | SAMN05192544_101214 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.448 |
SEI24847.1 | SEI24844.1 | SAMN05192544_105446 | SAMN05192544_105445 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Drug resistance transporter, EmrB/QacA subfamily. | 0.564 |
SEI24847.1 | SEI28519.1 | SAMN05192544_105446 | SAMN05192544_11362 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | LysR substrate binding domain-containing protein. | 0.741 |
SEI28519.1 | SEI24847.1 | SAMN05192544_11362 | SAMN05192544_105446 | LysR substrate binding domain-containing protein. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.741 |