Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH97670.1 | SEI25009.1 | SAMN05192544_101467 | SAMN05192544_105557 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein; Belongs to the UPF0246 family. | 0.814 |
SEI04485.1 | SEI25009.1 | SAMN05192544_101771 | SAMN05192544_105557 | Microcin C transport system permease protein. | Hypothetical protein; Belongs to the UPF0246 family. | 0.425 |
SEI13453.1 | SEI25009.1 | SAMN05192544_102430 | SAMN05192544_105557 | High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | Hypothetical protein; Belongs to the UPF0246 family. | 0.433 |
SEI21101.1 | SEI25009.1 | SAMN05192544_10393 | SAMN05192544_105557 | MFS transporter, CP family, cyanate transporter. | Hypothetical protein; Belongs to the UPF0246 family. | 0.703 |
SEI25006.1 | SEI25009.1 | SAMN05192544_105556 | SAMN05192544_105557 | Putative toxin-antitoxin system toxin component, PIN family. | Hypothetical protein; Belongs to the UPF0246 family. | 0.605 |
SEI25006.1 | SEI25011.1 | SAMN05192544_105556 | SAMN05192544_105558 | Putative toxin-antitoxin system toxin component, PIN family. | Murein tripeptide amidase MpaA. | 0.517 |
SEI25009.1 | SEH97670.1 | SAMN05192544_105557 | SAMN05192544_101467 | Hypothetical protein; Belongs to the UPF0246 family. | Predicted arabinose efflux permease, MFS family. | 0.814 |
SEI25009.1 | SEI04485.1 | SAMN05192544_105557 | SAMN05192544_101771 | Hypothetical protein; Belongs to the UPF0246 family. | Microcin C transport system permease protein. | 0.425 |
SEI25009.1 | SEI13453.1 | SAMN05192544_105557 | SAMN05192544_102430 | Hypothetical protein; Belongs to the UPF0246 family. | High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.433 |
SEI25009.1 | SEI21101.1 | SAMN05192544_105557 | SAMN05192544_10393 | Hypothetical protein; Belongs to the UPF0246 family. | MFS transporter, CP family, cyanate transporter. | 0.703 |
SEI25009.1 | SEI25006.1 | SAMN05192544_105557 | SAMN05192544_105556 | Hypothetical protein; Belongs to the UPF0246 family. | Putative toxin-antitoxin system toxin component, PIN family. | 0.605 |
SEI25009.1 | SEI25011.1 | SAMN05192544_105557 | SAMN05192544_105558 | Hypothetical protein; Belongs to the UPF0246 family. | Murein tripeptide amidase MpaA. | 0.714 |
SEI25009.1 | mnmC | SAMN05192544_105557 | SAMN05192544_1001107 | Hypothetical protein; Belongs to the UPF0246 family. | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.549 |
SEI25011.1 | SEI25006.1 | SAMN05192544_105558 | SAMN05192544_105556 | Murein tripeptide amidase MpaA. | Putative toxin-antitoxin system toxin component, PIN family. | 0.517 |
SEI25011.1 | SEI25009.1 | SAMN05192544_105558 | SAMN05192544_105557 | Murein tripeptide amidase MpaA. | Hypothetical protein; Belongs to the UPF0246 family. | 0.714 |
mnmC | SEI25009.1 | SAMN05192544_1001107 | SAMN05192544_105557 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Hypothetical protein; Belongs to the UPF0246 family. | 0.549 |