Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH47813.1 | SEI11791.1 | SAMN05192544_1002237 | SAMN05192544_102285 | 5-carboxymethyl-2-hydroxymuconate isomerase. | DNA-binding transcriptional regulator, MarR family. | 0.440 |
SEH47813.1 | SEI25548.1 | SAMN05192544_1002237 | SAMN05192544_105934 | 5-carboxymethyl-2-hydroxymuconate isomerase. | Predicted arabinose efflux permease, MFS family. | 0.415 |
SEH53037.1 | SEH80381.1 | SAMN05192544_1003129 | SAMN05192544_100920 | Transcriptional regulator, LuxR family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.764 |
SEH53037.1 | SEI13881.1 | SAMN05192544_1003129 | SAMN05192544_1024100 | Transcriptional regulator, LuxR family. | Hypothetical protein. | 0.759 |
SEH53037.1 | SEI23570.1 | SAMN05192544_1003129 | SAMN05192544_104849 | Transcriptional regulator, LuxR family. | FimV C-terminal domain-containing protein. | 0.675 |
SEH53037.1 | SEI25548.1 | SAMN05192544_1003129 | SAMN05192544_105934 | Transcriptional regulator, LuxR family. | Predicted arabinose efflux permease, MFS family. | 0.529 |
SEH80381.1 | SEH53037.1 | SAMN05192544_100920 | SAMN05192544_1003129 | Glycosyltransferase involved in cell wall bisynthesis. | Transcriptional regulator, LuxR family. | 0.764 |
SEH80381.1 | SEI13881.1 | SAMN05192544_100920 | SAMN05192544_1024100 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.773 |
SEH80381.1 | SEI23570.1 | SAMN05192544_100920 | SAMN05192544_104849 | Glycosyltransferase involved in cell wall bisynthesis. | FimV C-terminal domain-containing protein. | 0.756 |
SEH80381.1 | SEI25548.1 | SAMN05192544_100920 | SAMN05192544_105934 | Glycosyltransferase involved in cell wall bisynthesis. | Predicted arabinose efflux permease, MFS family. | 0.465 |
SEI08304.1 | SEI13881.1 | SAMN05192544_1019118 | SAMN05192544_1024100 | Carbon monoxide dehydrogenase subunit G. | Hypothetical protein. | 0.416 |
SEI08304.1 | SEI23570.1 | SAMN05192544_1019118 | SAMN05192544_104849 | Carbon monoxide dehydrogenase subunit G. | FimV C-terminal domain-containing protein. | 0.503 |
SEI08304.1 | SEI25548.1 | SAMN05192544_1019118 | SAMN05192544_105934 | Carbon monoxide dehydrogenase subunit G. | Predicted arabinose efflux permease, MFS family. | 0.429 |
SEI11791.1 | SEH47813.1 | SAMN05192544_102285 | SAMN05192544_1002237 | DNA-binding transcriptional regulator, MarR family. | 5-carboxymethyl-2-hydroxymuconate isomerase. | 0.440 |
SEI11791.1 | SEI25548.1 | SAMN05192544_102285 | SAMN05192544_105934 | DNA-binding transcriptional regulator, MarR family. | Predicted arabinose efflux permease, MFS family. | 0.506 |
SEI13881.1 | SEH53037.1 | SAMN05192544_1024100 | SAMN05192544_1003129 | Hypothetical protein. | Transcriptional regulator, LuxR family. | 0.759 |
SEI13881.1 | SEH80381.1 | SAMN05192544_1024100 | SAMN05192544_100920 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.773 |
SEI13881.1 | SEI08304.1 | SAMN05192544_1024100 | SAMN05192544_1019118 | Hypothetical protein. | Carbon monoxide dehydrogenase subunit G. | 0.416 |
SEI13881.1 | SEI23570.1 | SAMN05192544_1024100 | SAMN05192544_104849 | Hypothetical protein. | FimV C-terminal domain-containing protein. | 0.746 |
SEI13881.1 | SEI25548.1 | SAMN05192544_1024100 | SAMN05192544_105934 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.471 |
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