Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH99944.1 | SEI15614.1 | SAMN05192544_101537 | SAMN05192544_1026109 | Methylamine utilisation protein MauE. | Outer membrane protein (porin). | 0.561 |
SEH99944.1 | SEI20195.1 | SAMN05192544_101537 | SAMN05192544_103675 | Methylamine utilisation protein MauE. | Prevent-host-death family protein. | 0.445 |
SEH99944.1 | SEI21491.1 | SAMN05192544_101537 | SAMN05192544_104036 | Methylamine utilisation protein MauE. | Outer membrane protein (porin). | 0.746 |
SEH99944.1 | SEI22983.1 | SAMN05192544_101537 | SAMN05192544_104556 | Methylamine utilisation protein MauE. | Hypothetical protein. | 0.538 |
SEH99944.1 | SEI25671.1 | SAMN05192544_101537 | SAMN05192544_106049 | Methylamine utilisation protein MauE. | Hypothetical protein. | 0.490 |
SEH99944.1 | SEI26027.1 | SAMN05192544_101537 | SAMN05192544_106513 | Methylamine utilisation protein MauE. | Outer membrane protein (porin). | 0.615 |
SEH99944.1 | SEI27050.1 | SAMN05192544_101537 | SAMN05192544_10819 | Methylamine utilisation protein MauE. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.442 |
SEI15614.1 | SEH99944.1 | SAMN05192544_1026109 | SAMN05192544_101537 | Outer membrane protein (porin). | Methylamine utilisation protein MauE. | 0.561 |
SEI15614.1 | SEI20195.1 | SAMN05192544_1026109 | SAMN05192544_103675 | Outer membrane protein (porin). | Prevent-host-death family protein. | 0.470 |
SEI15614.1 | SEI22983.1 | SAMN05192544_1026109 | SAMN05192544_104556 | Outer membrane protein (porin). | Hypothetical protein. | 0.469 |
SEI15614.1 | SEI25671.1 | SAMN05192544_1026109 | SAMN05192544_106049 | Outer membrane protein (porin). | Hypothetical protein. | 0.504 |
SEI15614.1 | SEI27050.1 | SAMN05192544_1026109 | SAMN05192544_10819 | Outer membrane protein (porin). | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.513 |
SEI20195.1 | SEH99944.1 | SAMN05192544_103675 | SAMN05192544_101537 | Prevent-host-death family protein. | Methylamine utilisation protein MauE. | 0.445 |
SEI20195.1 | SEI15614.1 | SAMN05192544_103675 | SAMN05192544_1026109 | Prevent-host-death family protein. | Outer membrane protein (porin). | 0.470 |
SEI20195.1 | SEI21491.1 | SAMN05192544_103675 | SAMN05192544_104036 | Prevent-host-death family protein. | Outer membrane protein (porin). | 0.540 |
SEI20195.1 | SEI22983.1 | SAMN05192544_103675 | SAMN05192544_104556 | Prevent-host-death family protein. | Hypothetical protein. | 0.543 |
SEI20195.1 | SEI25671.1 | SAMN05192544_103675 | SAMN05192544_106049 | Prevent-host-death family protein. | Hypothetical protein. | 0.507 |
SEI20195.1 | SEI26027.1 | SAMN05192544_103675 | SAMN05192544_106513 | Prevent-host-death family protein. | Outer membrane protein (porin). | 0.517 |
SEI21491.1 | SEH99944.1 | SAMN05192544_104036 | SAMN05192544_101537 | Outer membrane protein (porin). | Methylamine utilisation protein MauE. | 0.746 |
SEI21491.1 | SEI20195.1 | SAMN05192544_104036 | SAMN05192544_103675 | Outer membrane protein (porin). | Prevent-host-death family protein. | 0.540 |
page 1 of 3